Here I present: Torbjorn CASPERSSON, Costa LOMAKKA and Lore ZECH, “The 24 fluorescence patterns of the human metaphase chromosomes”, 1971.
INTRODUCTION. This is a classic reference paper in cytogenetics published in 1971, the same time as Marina Seabright’ Giemsa stain. Fluorescence stained chromosomes are colorful. Colorfully presented also is a “table of gene symbols”. Symbols are simply abbreviations of terms for genetic loci (locus). Following the “color table of symbols” are the chromosomes for the gene locus is on. Example, symbol for “insulin’ gene” is INS; and IDDM is the gene symbol for “insulin’-dependent diabetes mellitus”. In communication the preference, is symbol abbreviations as they are more compact in writing.
CHROMOSOMES.
A. 1. SELL CTSE MUC1 ITLN2 TSHB KISS1 IDDM HRPT1 NGFB HSD11B1 REN ADORA1 BT2 ERRFI1 SLC2A5 AGT FRAP1 FH NPHS2 RHBG HPC1 WNT4 DFNA1 WNT3A EPHB2 COL8A2 VANGL2 NOTCH2 HSPG2 ALPL RUNX3 TAL1 GSTM1 TPM3 ACTA1 MTHFR MPL PRCC S100A7 RASSF5 MS SELP FCER1A IL10 TNESF6 SLE SELE CD244 STGD1 ARMD1 KCNQ4 USH2A CA6 CMT1B LEPR NTRK1 POU3F1 FOXE3 GJA8 ARMD4 MSH4 PTGS2 TNFSF6 PAX7 .
2. LHCGR MTS NF1 SRD5A2 INHA MSH6 SFTPB FSHR POMC GCG CALCRL COL4A3 DPP4 SMDP1 PAX8 IL17A PAX3 BBS CD8A ACTG2 POMC ADD2 CD207 ALS1 IL8RB PDCD1 IGKC REEP1 CREB1 CRIM1 TAL1 ID2 SIX3 .
3. COL7A1 CTNNB1 GM1 MTS CDC25A FHIT GHRL POU1F1 THRB HHC1 GCG ZNF148 PTHR1 VHL DRD3 RCC1 FBS CLDN16 MST1 PPARG RAB11FIP5 LAMB2 EIF2B5 SFRS10 CLDN16 WNT7A RHOA HPS SCA7 SCN5A THPO ALCAM PSOR1 ZNF288 IL5RA IL12A CD80 NKTR RHO USH3A USH3 DAG MITF SCN10A CLDN11 FOXL2 BCL6 CPA3 .
B. 4. AREG HD PKD2 TGCT MSH6 EGF ATOH1 PITX2 GNRHR KIT NFKB1 ADH4 NR3C2 PKD2 HGFAC LADD TLR2 RIEG1 SLC4A4 MEPE PROM1 PPBP SPP1 CXCL13 CXCL5 CXCL6 CD38 PDE6B ATOH1 TLR2 REST FGF2 CXCL1 SPATA4 LEF1 .
5. SPINK5 APC CCL28 LADD DBP NKX2E GDNF SCGB3A2 PROP1 CRHBP IL4 TGF7 GCCR CD2AP FOXI1 SPARC PCBD2 NDST1 FGF10 ANKH MARVELD2 BBS FLT4 TERT IL9 LCP2 CD14 PSOR1 PDB IL12B CSF2 IL3 GZMA KIT SLC12A7 EBF RASA1 PIK3R1 GDNF SMN1 NEUROOG1 TNF NYD-SP16 PCOS1 NRG2 .
C. 6. PPARD ESR1 TNF EDN1 PRL PRDM1 IL17F MARCKS HCRTR2 IDDM NUMBR CGA FIH PARK2 SIDDT PKD1 SGK VIL2 AQP1 SLC22A2 ARG1 ARPKD VEGF APOA1 PRDM1 MYB PSORS1 RUNX2 MS HLA-DPB1 IGAD1 IL4 PRPH2 LHFPL5 CJD THBS2 OLIG3 PRSS16 FOXO3A .
7. KLK7 SHH LEP CFTR ICA1 HOXA10 CF GHRHR IL6 VIPR2 GPR37 CALCR NPC1L1 HGF CFTR TCRG AQP1 EGFR STEAP2 LEP SLC26A4 NPY BRAF MYC BBS DNAH11 COL1A2 EPO CLCN1 GTF1IRD1 IL6 IL7 PRES .
8. FABP5 WISP1 AEZ TRHR CRH SDC2 CALCR GFRA2 IKBKB PTK2 TNFRSF11B ADRA1A STAR NR5A1 RCC1 HNF4G GPT KCNV1 WRN SNAT2 SOX17 GATA4 ANGPT2 LPL EYA1 HS FOXH1 TM7SF4 STGD1 FGFR1 REEP4 NRG1 .
9. NOTCH1 BCNS CHH CEL LCN1 ABCA1 MODY8 CDKN2A NR5A1 BAI1 KLF4 AQP3 PCA3 CA2 BBS LAMC3 TPM2 DCTN3 TTP PAX5 WHRN DFNB7 IBMPFD TSC1 GRIN1 TESK1 NR5A1 .
10. KRT10 CD PAX2 LCN1 PTEN EMX2 TACR2 RET GPR26 MEN2A BLNK KLF6 HABP2 CSPG6 PTGDS TLX1 CXCL12 HPS ACTA2 HK1 CXCL12 ENTPD1 PRG1 .
11. RDX ATM TRAF6 CCND1 MUC2 LDHA MEN1 MMP7 HBB NCAM1 FSHB CCKBR INS CALCA HRPT1 CD151 WT1 FOLH1 ZNF145 CPT1A KCNJ1 LYVE1 VHL OCA1 BBS DYNC2H1 MMP20 UGB PAX6 HPS P2RX3 BDNF NAV2 UCP2 TCIRG1 AT SLE TECTA USH1C OMP MYO7A CNTF SOX6 PAX2 VMD FSHB WT1 .
12. CDK4 KRTHB1 K6IRS1 MGB2 ATP2A2 TGCT VWT SCNN1A AVPR1A IDDM IAPP SYT1 PHA1 PTPRQ CYP27B1 TCF1 GYS2 ATM GJB2 CCNA1 BRA2 KRT8 AQP6 CD6 BBS PTHLH ACG2 COL2A1 TPI1 ATP2A2 CACN1C CLEC4C IL23A VDR ALS1 KITG1 CD4 IRAK3 SLE KLRC1 IFNG SOX5 MIP EDNRB WNT1 NTF3 NOS1 NINJ2 ENO2 .
X. DMD WT1 ARMCX2 ED1 MECP2 NROB1 SCIDX1 AR ALD GRPK IDDM BRS3 MAOA AIS L1CAM WAS PHEX OCRL CLCN5 TMEM27 FMR1 HIGM1 POU3F4 LWD RPGR ND SPG2 FMR1 NROB1 GATA1 BMP15 BTK KAL1 G6PD PMD VSIG4 SMAX1 CACNA1 CBD .
D. 13. RB1 ED2 EDNRB IPF1 GTS WT1 SLE SLC25A30 BRCA2 GJB6 FLT1 FOXO1A CYSLTR2 TNFSF11 TNFS13B FLT3 SPRY2 GJB2 CCNA1 .
14. TGM1 ESR2 IL25 TITF1 SLC7A8 FOXA1 IRS2 PSEN1 LGALS3 COCH OTX2 TTC8 MYH7 MYH6 CTSG DLK1 SGD CMA1 IGHG1 IGHM TCRD RDH12 JAG2 HIF18 MJD NOVA1 TCL1A HSPA2 .
15. FGF7 MFS CYP19A1 NMB RHCG ONECUT1 PWS MFGE8 SLC12A1 BCL8 BBS POLG ACTC RAB27A FBN1 B2M SEMA7A NR2E3 CHRNA3 AP3B2 THBS1 LRRN6N CYP11A1 .
E. 16. PPL MAPK3 PDK1 FANCA CYP19A1 IL17C HBA1 GPR56 GRIN2A PHA1 MMP2 PHKG2 FTO SPG7 ARPKD SLC9A3R2 FOXF1 SLC5A2 IL32 CDH1 BBS HYDIN CDH15 NOMO2 DHS CES1 MS TPSD IL4R CD19 .
17. FLOT2 KRT10 KRT14 KRT17 BRCA1 TP53 NF1 CYP19A1 ERBB2 GH1 CRHR1 GIP GLP2R RCC1 ACE CA4 WNK4 HGS WNT9B KCNJ16 TBX21 COL1A FOXJ1 DLX3 PEDF SOX15 GJC1 MYH1 SLC4A1 BIRC5 CCL2 GAS PSORS1 CCL18 ALDH3A1 OMG BAIAP2 TRPV1 CVID CSF3 DNAH11 KRT20 GSD2 OR1D2 MYO15A GUCY2D IGAD2 .
18. LAMA3 DSG1 GRP ADCYAP1 THRAP4 GCCD1 BCL2 ZNF236 MEP1B TTR SMAD2 PAFAH1B1 TYMS PAI2 PDB NPC1 GNAL AQP4 .
F. 19. TGFR1 NALP7 CF CGB LDLR CD97 RETN PGPEP1 TCO AMH APOE STK11 SPINT2 PCLD INSR NPHS1 KLK3 KLK4 TGFB1 TGCT HPS GPI SCN1B RYR1 PSORS1 CD209 SCN1 PIN1 DBA BCL2 TCF3 CEACAM1 KIR2DL3 ARMD1 SCN1B LIM2 PJS LHB NAPA VN1R1 CRLF1 .
20. TMG2 CENPB SLC5A5 GHRH AHO MAS AVP OXT GNAS AR PCK1 HNF4A CEBPB ALGS1 BBS SLC4A11 PRNP SDC4 CD40 NCR1 JAG1 PROKR2 CJD OTOR EDN3 CDC25B .
G. 21. ITGB2 TFF3 GCCD2 COL18A1 SLC19A1 PFKL MRAP ANKRD21 CBS SOD1 CNN2 RUNX1 APP LAD CLDN14 KCNJ6 OLIG2 CRYAA .
22. PPARA GPR24 DGS COMT PDGFB SLC5A1 RSRS TBX1 HPS MYH9 ALS1 CSF2RB IGLC1 NF2 EWSR1 SOX10 .
Y. LWD USP9Y RBMY1A1 DAZ DMD .
